publications – Page 11 – Systems Biology and Bioinformatics Group

December 26, 2016October 16, 2020

Finotello F, Mastrorilli E, Di Camillo B. Measuring the diversity of the human microbiota with targeted next-generation sequencing. Briefings in Bioinformatics 2016

December 21, 2016October 16, 2020

Franzin A, Sambo F, Di Camillo B. bnstruct: an R package for Bayesian Network structure learning in the presence of missing data. Bioinformatics 2016

December 12, 2016October 16, 2020

Baruzzo G, E Hayer K, Ji Kim E, Di Camillo B, A FitzGerald G, R Grant G. Simulation-based comprehensive benchmarking of RNA-seq aligners. Nature Methods 2016

June 28, 2016October 16, 2020

Noren DP, Long BL, Norel R, Rrhissorrakrai K, Hess K, Hu CW, Bisberg AJ, Schultz A, Engquist E, Liu L, Lin X, Chen GM, Xie H, Hunter GA, Boutros PC, Stepanov O, DREAM 9 AML-OPC Consortium (Di Camillo B within DREAM 9 AML-OPC Consortium), et al. A Crowdsourcing Approach to Developing and Assessing Prediction Algorithms for AML Prognosis. PLoS Computational Biology 2016

June 1, 2016October 16, 2020

Di Camillo B, Carlon A, Eduati F, Toffolo G. A rule-based model of insulin signalling pathway. BMC Systems Biology 2016

March 12, 2016October 16, 2020

Grassi A, Di Camillo B, Ciccarese F, Agnusdei V, Zanovello P, Amadori A, Finesso L, Indraccolo S, Toffolo GM. Reconstruction of gene regulatory modules from RNA silencing of IFN-α modulators: experimental set-up and inference method. BMC Genomics 2016

March 2, 2016October 16, 2020

Milan M, Matozzo V, Pauletto M, Di Camillo B, Giacomazzo M, Boffo L, Binato G, Marin MG, Patarnello T, Bargelloni L. Can ecological history influence response to pollutants? Transcriptomic analysis of Manila clam collected in different Venice lagoon areas and exposed to heavy metal. Aquatic Toxicology 2016

February 22, 2016October 16, 2020

Hill SM, Heiser LM, Cokelaer T, Unger M, Nesser NK, Carlin DE, Zhang Y, Sokolov A, Paull EO, Wong CK, Graim K, Bivol A, Wang H, Zhu F, Afsari B, Danilova LV, Favorov AV, Lee WS, Taylor D, Hu CW, Long BL, Noren DP, Bisberg AJ; HPN-DREAM Consortium, et al. Inferring causal molecular networks: empirical assessment through a community-based effort. Nature Methods 2016

October 15, 2015October 16, 2020

Marini S, Trifoglio E, Barbarini N, Sambo F, Di Camillo B, Malovini A, Manfrini M, Cobelli C, Bellazzi R. A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes. J Biomed Inform 2015

June 1, 2015October 16, 2020

Sanavia T, Finotello F, Di Camillo B. FunPat: function-based pattern analysis on RNA-seq time series data. BMC Genomics 2015