publications – Page 14 – Systems Biology and Bioinformatics Group

February 10, 2013October 16, 2020

Aghaeepour N, Finak G, FlowCAP Consortium, DREAM Consortium, Hoos H, Mosmann TR, Brinkman R, Gottardo R, Scheuermann RH. Critical assessment of automated flow cytometry data analysis techniques. Nat Methods 2013

January 27, 2013October 16, 2020

Radivojac P, Clark WT, Oron TR, et al. A large-scale evaluation of computational protein function prediction. Nat Methods 2013

January 9, 2013October 16, 2020

Zycinski G, Barla A, Squillario M, Sanavia T, Di Camillo B, Verri A. Knowledge Driven Variable Selection (KDVS) – a new approach to enrichment analysis of gene signatures obtained from high-throughput data. Source Code for Biology and Medicine 2013

November 9, 2012October 16, 2020

Finotello F, Lavezzo E, Barzon L, Mazzon P, Fontana P, Toppo S, Di Camillo B. A strategy to reduce technical variability and bias in RNA sequencing data. Erik Bongcam-Rudloff editor. EMBnet Journal Vol 18(B). Oral communication in NETTAB 2012. EMBnet 2012

October 25, 2012October 16, 2020

Giobbe GG, Zagallo M, Riello M, Serena E, Masi G, Barzon L, Di Camillo B, Elvassore N. Confined 3D microenvironment regulates early differentiation in human pluripotent stem cells. Biotechnol Bioeng 2012

September 15, 2012October 16, 2020

Eduati F, De Las Rivas J, Di Camillo B, Toffolo G, Saez-Rodriguez J. Integrating literature-constrained and data-driven inference of signaling networks. Bioinformatics 2012

September 15, 2012October 16, 2020

Sambo F, Montes de Oca M, Di Camillo B, Toffolo G, and Stützle T. More: Mixed optimization for reverse engineering. an application to modeling biological networks response via sparse systems of nonlinear differential equations. IEEE/ACM Transactions on Computational Biology and Bioinformatics 2012

September 15, 2012October 16, 2020

Badaloni S, Di Camillo B, and Sambo F. Qualitative reasoning for biological network inference from systematic perturbation experiments. IEEE/ACM Computational Biology and Bioinformatics 2012

September 7, 2012October 16, 2020

Sambo F, Trifoglio E, Di Camillo B, Toffolo G, and Cobelli C. Bag of naïve bayes: biomarker selection and classification from genome-wide snp data. BMC Bioinformatics 2012

May 15, 2012October 16, 2020

Finotello F, Lavezzo E, Fontana P, Peruzzo D, Albiero A, Barzon L, Falda M, Di Camillo B, and Toppo S. Comparative analysis of algorithms for whole-genome assembly of pyrosequencing data. Briefings in Bioinformatics 2012